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Experiment - SRX4862638

Microbiota from mock community through Nanopore sequencing

Project PRJNA495486
Sampe SAMN10219775
Instrument Platform Oxford Nanopore
Instrument Model MinION
Library Name Z_rrn_1
Description We amplified and sequenced two different markers in each sample: full-length 16S rRNA and the whole rrn operon (16S rRNA gene ITS 23S rRNA gene). The samples included a clinical isolate of Staphylococcus pseudintermedius, two mock communities (HM-783D, Bei Resources; D6306, ZymoBIOMICS) and two pools of low-biomass samples (chin and dorsal skin of healthy dogs). Nanopore sequencing was performed on MinION (Oxford Nanopore Technologies, ONT) using 1D PCR barcoding kit.

Run 1

Run Accession Format External links
SRR8029986 FASTQ ENA website
NCBI website