Project

Run - SRR8113899

Project PRJNA498591
Sample SAMN10320202
Experiment SRX4940268
Instrument Platform PacBio SMRT
Instrument Model PacBio RS II
Process Database : MIrROR_DB_r01; Pipeline : MIrROR.py(v0.1)
Note Forward primer: CAGCMGCCGCGGTAA
Reverse primer: CCRAMCTGTCTCACGACG
Before filtering After filtering(length/quality)
Mean read length 2,986.3 3,888.0
Mean read quality 20.9 19.2
Median read length 3,776.0 3,891.0
Median read quality 20.7 19.5
Number of reads 25,253.0 14,664.0
Read length N50 3,869.0 3,893.0
STDEV read length 1,254.8 149.2
Total bases 75,413,521.0 57,014,244.0
Before filtering After filtering(length/quality)
#Name SRR8113899.paf
p__Aquificota 42
p__Aquificota;c__Desulfurobacteriia 42
p__Aquificota;c__Desulfurobacteriia;o__Desulfurobacteriales 42
p__Aquificota;c__Desulfurobacteriia;o__Desulfurobacteriales;f__Desulfurobacteriaceae 42
p__Aquificota;c__Desulfurobacteriia;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Desulfurobacterium 42
p__Aquificota;c__Desulfurobacteriia;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Desulfurobacterium;s__Desulfurobacterium_thermolithotrophum 42
p__Bacteroidota 50
p__Bacteroidota;c__Kryptonia 50
p__Bacteroidota;c__Kryptonia;o__Kryptoniales 50
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae 50
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Chrysopegis 19
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Chrysopegis;s__Chrysopegis_kryptomonas 19
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Kryptonium 1
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Kryptonium;s__Kryptonium_thompsoni 1
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Thermokryptus 30
p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Thermokryptus;s__Thermokryptus_mobilis 30
p__Calditrichota 1
p__Calditrichota;c__Calditrichia 1
p__Calditrichota;c__Calditrichia;o__Calditrichales 1
p__Calditrichota;c__Calditrichia;o__Calditrichales;f__Calditrichaceae 1
p__Calditrichota;c__Calditrichia;o__Calditrichales;f__Calditrichaceae;g__Caldithrix 1
p__Calditrichota;c__Calditrichia;o__Calditrichales;f__Calditrichaceae;g__Caldithrix;s__Caldithrix_abyssi 1
p__Campylobacterota 4
p__Campylobacterota;c__Campylobacteria 4
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales 4
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae 1
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Halarcobacter 1
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Halarcobacter;s__Halarcobacter_sp001895145 1
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae 3
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas 3
p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas;s__Sulfurimonas_autotrophica 3
p__Chloroflexota 10
p__Chloroflexota;c__Anaerolineae 10
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales 8
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae 8
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Ornatilinea 4
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Ornatilinea;s__Ornatilinea_apprima 4
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Thermanaerothrix 4
p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Thermanaerothrix;s__Thermanaerothrix_daxensis 4
p__Chloroflexota;c__Anaerolineae;o__Caldilineales 1
p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae 1
p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Litorilinea 1
p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Litorilinea;s__Litorilinea_aerophila 1
p__Chloroflexota;c__Anaerolineae;o__Promineofilales 1
p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae 1
p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__GCA-2746795 1
p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__GCA-2746795;s__GCA-2746795_sp002746795 1
p__Cyanobacteria 1
p__Cyanobacteria;c__Cyanobacteriia 1
p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales 1
p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales;f__Thermosynechococcaceae 1
p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales;f__Thermosynechococcaceae;g__PCC-6312 1
p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales;f__Thermosynechococcaceae;g__PCC-6312;s__PCC-6312_sp000316685 1
p__Desulfobacterota 15
p__Desulfobacterota;c__Desulfofervidia 1
p__Desulfobacterota;c__Desulfofervidia;o__Desulfofervidales 1
p__Desulfobacterota;c__Desulfofervidia;o__Desulfofervidales;f__Desulfofervidaceae 1
p__Desulfobacterota;c__Desulfofervidia;o__Desulfofervidales;f__Desulfofervidaceae;g__Desulfofervidus 1
p__Desulfobacterota;c__Desulfofervidia;o__Desulfofervidales;f__Desulfofervidaceae;g__Desulfofervidus;s__Desulfofervidus_auxilii 1
p__Desulfobacterota;c__Syntrophobacteria 1
p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales 1
p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae 1
p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__Syntrophobacter 1
p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__Syntrophobacter;s__Syntrophobacter_fumaroxidans 1
p__Desulfobacterota;c__Thermodesulfobacteria 13
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales 13
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae 13
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium 12
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium_commune 2
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium_geofontis 10
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermosulfurimonas 1
p__Desulfobacterota;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermosulfurimonas;s__Thermosulfurimonas_dismutans 1
p__Dictyoglomota 3
p__Dictyoglomota;c__Dictyoglomia 3
p__Dictyoglomota;c__Dictyoglomia;o__Dictyoglomales 3
p__Dictyoglomota;c__Dictyoglomia;o__Dictyoglomales;f__Dictyoglomaceae 3
p__Dictyoglomota;c__Dictyoglomia;o__Dictyoglomales;f__Dictyoglomaceae;g__Dictyoglomus 3
p__Dictyoglomota;c__Dictyoglomia;o__Dictyoglomales;f__Dictyoglomaceae;g__Dictyoglomus;s__Dictyoglomus_thermophilum 3
p__Firmicutes 262
p__Firmicutes;c__Bacilli 2
p__Firmicutes;c__Bacilli;o__Bacillales 2
p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae 2
p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus 2
p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus_cereus 2
p__Firmicutes;c__Desulfotomaculia 258
p__Firmicutes;c__Desulfotomaculia;o__Ammonifexales 258
p__Firmicutes;c__Desulfotomaculia;o__Ammonifexales;f__Ammonificaceae 258
p__Firmicutes;c__Desulfotomaculia;o__Ammonifexales;f__Ammonificaceae;g__Ammonifex 258
p__Firmicutes;c__Desulfotomaculia;o__Ammonifexales;f__Ammonificaceae;g__Ammonifex;s__Ammonifex_degensii 258
p__Firmicutes;c__Thermaerobacteria 1
p__Firmicutes;c__Thermaerobacteria;o__Thermaerobacterales 1
p__Firmicutes;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae 1
p__Firmicutes;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae;g__Thermaerobacter 1
p__Firmicutes;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae;g__Thermaerobacter;s__Thermaerobacter_subterraneus 1
p__Firmicutes;c__Thermoanaerobacteria 1
p__Firmicutes;c__Thermoanaerobacteria;o__Caldicellulosiruptorales 1
p__Firmicutes;c__Thermoanaerobacteria;o__Caldicellulosiruptorales;f__Caldicellulosiruptoraceae 1
p__Firmicutes;c__Thermoanaerobacteria;o__Caldicellulosiruptorales;f__Caldicellulosiruptoraceae;g__Caldicellulosiruptor 1
p__Firmicutes;c__Thermoanaerobacteria;o__Caldicellulosiruptorales;f__Caldicellulosiruptoraceae;g__Caldicellulosiruptor;s__Caldicellulosiruptor_obsidiansis 1
p__Goldbacteria 1
p__Goldbacteria;c__PGYV01 1
p__Goldbacteria;c__PGYV01;o__PGYV01 1
p__Goldbacteria;c__PGYV01;o__PGYV01;f__PGYV01 1
p__Goldbacteria;c__PGYV01;o__PGYV01;f__PGYV01;g__PGYV01 1
p__Goldbacteria;c__PGYV01;o__PGYV01;f__PGYV01;g__PGYV01;s__PGYV01_sp002839855 1
p__Krumholzibacteriota 2
p__Krumholzibacteriota;c__Krumholzibacteria 2
p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63 2
p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63 2
p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__UM-FILTER-65-15 2
p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__UM-FILTER-65-15;s__UM-FILTER-65-15_sp002790835 2
p__Latescibacterota 1
p__Latescibacterota;c__MVCY01 1
p__Latescibacterota;c__MVCY01;o__MVCY01 1
p__Latescibacterota;c__MVCY01;o__MVCY01;f__MVCY01 1
p__Latescibacterota;c__MVCY01;o__MVCY01;f__MVCY01;g__MVCY01 1
p__Latescibacterota;c__MVCY01;o__MVCY01;f__MVCY01;g__MVCY01;s__MVCY01_sp002049985 1
p__Proteobacteria 6
p__Proteobacteria;c__Alphaproteobacteria 4
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales 3
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium;s__Methylobacterium_organophilum 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae 2
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium 2
p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium;s__Bradyrhizobium_sp900103365 2
p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HL-12 1
p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HL-12;s__HL-12_sp900177545 1
p__Proteobacteria;c__Gammaproteobacteria 2
p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales 2
p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae 2
p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas 2
p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas_maltophilia 2
p__Thermosulfidibacterota 80
p__Thermosulfidibacterota;c__Thermosulfidibacteria 80
p__Thermosulfidibacterota;c__Thermosulfidibacteria;o__Thermosulfidibacterales 80
p__Thermosulfidibacterota;c__Thermosulfidibacteria;o__Thermosulfidibacterales;f__Thermosulfidibacteraceae 80
p__Thermosulfidibacterota;c__Thermosulfidibacteria;o__Thermosulfidibacterales;f__Thermosulfidibacteraceae;g__Thermosulfidibacter 80
p__Thermosulfidibacterota;c__Thermosulfidibacteria;o__Thermosulfidibacterales;f__Thermosulfidibacteraceae;g__Thermosulfidibacter;s__Thermosulfidibacter_takaii 80
p__Thermotogota 280
p__Thermotogota;c__Thermotogae 280
p__Thermotogota;c__Thermotogae;o__Thermotogales 280
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae 280
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Pseudothermotoga 14
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Pseudothermotoga;s__Pseudothermotoga_thermarum 14
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga 266
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga_maritima 126
p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga_sp002866025 140

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